- Fukuoka - Fukuoka (FUK, RJFF)
- Kagoshima - Kagoshima (KOJ, RJFK)
- Nagoya - Chūbu Centrair International (NGO, RJGG)
- Naha - Naha (OKA, ROAH)
- Narita - Narita International (NRT, RJAA)
- Okinawa - Kadena Air Force Base (DNA, RODN)
- Osaka - Itami International (ITM, RJOO)
- Osaka - Kansai International (KIX, RJBB)
- Sapporo - Chitose (CTS, RJCC)
- Tokyo - Haneda International (HND, RJTT)
- Tokyo - Yokota Air Force Base (OKO, RJTY)
- Akita - Akita (AXT, RJSK)
- Amami O Shima - Amami O Shima (ASJ, RJKA)
- Aomori - Aomori (AOJ, RJSA)
- Asahikawa - Asahikawa (AKJ, RJEC)
- Fukue - Fukue (FUJ, RJFE)
- Fukushima - Fukushima (FKS, RJSF)
- Hachijo Jima - Hachijo Jima (HAC, RJTH)
- Hakodate - Hakodate (HKD, RJCH)
- Hanamaki - Hanamaki (HNA, RJSI)
- Hiroshima - Hiroshima (HIJ, RJOA)
- Iki - Iki (IKI, RJDB)
- Ishigaki - Ishigaki (ISG, ROIG)
- Iwakuni - Iwakuni Kintaikyo (IWK, RJOI)
- Iwo Jima Vol - Iwo Jima Air Base (IWO, RJAW)
- Izumo - Izumo (IZO, RJOC)
- Kikaiga Shima - Kikaiga Shima (KKX, RJKI)
- Kitakyushu - Kitakyushu (KKJ, RJFR)
- Kobe - Kobe (UKB, RJBE)
- Komatsu - Komatsu (KMQ, RJNK)
- Kumamoto - Kumamoto (KMJ, RJFT)
- Kume-jima - Kume-jima (UEO, ROKJ)
- Kushiro - Kushiro (KUH, RJCK)
- Masuda - Hagi-Iwami (IWJ, RJOW)
- Matsumoto - Matsumoto (MMJ, RJAF)
- Matsuyama - Matsuyama (MYJ, RJOM)
- Memanbetsu - Memanbetsu (MMB, RJCM)
- Misawa - Misawa (MSJ, RJSM)
- Miyake Jima - Miyake Jima (MYE, RJTQ)
- Miyako - Hirara (MMY, ROMY)
- Miyazaki - Miyazaki (KMI, RJFM)
- Monbetsu - Monbetsu (MBE, RJEB)
- Nagasaki - Nagasaki (NGS, RJFU)
- Nagoya - Nagoya/Komaki (NKM, RJNA)
- Nakashibetsu - Nakashibetsu (SHB, RJCN)
- Nankoku - Kōchi Ryōma (KCZ, RJOK)
- Niigata - Niigata (KIJ, RJSN)
- Obihiro - Obihiro (OBO, RJCB)
- Odate Noshiro - Odate Noshiro (ONJ, RJSR)
- Oita - Oita (OIT, RJFO)
- Okayama - Okayama (OKJ, RJOB)
- Oki Island - Oki Island (OKI, RJNO)
- Omitami - Ibaraki (IBR, RJAH)
- Oshima - Oshima (OIM, RJTO)
- Rishiri - Rishiri (RIS, RJER)
- Saga - Saga (HSG, RJFS)
- Sapporo - Okadama (OKD, RJCO)
- Sendai - Sendai (SDJ, RJSS)
- Shirahama - Shirahama (SHM, RJBD)
- Shizuoka - Shizuoka (FSZ, RJNS)
- Shonai - Shonai (SYO, RJSY)
- Takamatsu - Takamatsu (TAK, RJOT)
- Tokunoshima - Tokunoshima (TKN, RJKN)
- Tokushima - Tokushima (TKS, RJOS)
- Tottori - Tottori (TTJ, RJOR)
- Toyama - Toyama (TOY, RJNT)
- Tsushima - Tsushima (TSJ, RJDT)
- Ube - Ube (UBJ, RJDC)
- Wajima - Noto (NTQ, RJNW)
- Wakkanai - Hokkaido (WKJ, RJCW)
- Yakushima - Yakushima (KUM, RJFC)
- Yamagata - Junmachi (GAJ, RJSC)
- Yonago - Miho (YGJ, RJOH)
- Yonaguni - Yonaguni (OGN, ROYN)